PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026422083.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 792aa    MW: 86740 Da    PI: 6.1232
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026422083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-19116172157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k+
  XP_026422083.1 116 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 172
                     678899************************************************995 PP
2START203.67.9e-643105311206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++elv++ +++ep Wv+ +     e +n++e++++f+++ +     +++ea+r+s++v+m+++ lve+l+d + qW + +     +a +
  XP_026422083.1 310 ELAVAAMEELVQLSQLGEPIWVQRVngeftETLNEEEYVRTFPRGIGskpfgFKTEASRDSALVIMNCMSLVESLMDAN-QWMNLFSgivsRAVI 403
                     57899***************************************999********************************.*****999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     +e +s+g      galqlm+ e+q+ splvp R+++fvRy++q+g+ +w++vdvS+d+ ++++     +R +++pSg++i++++ng+skvtwveh
  XP_026422083.1 404 IEILSTGvagnsnGALQLMTGEFQVASPLVPtRESLFVRYCKQQGESTWAVVDVSLDHLRSNNP----IRFRRRPSGCIIQDMPNGYSKVTWVEH 494
                     *************************************************************997....*************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r +h+l+++lv+s++a+gak+w+a l+rqce+
  XP_026422083.1 495 VEVDDRAVHELYKPLVNSTIAFGAKRWLAVLDRQCER 531
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 792 aa     Download sequence    
MPAGIMLPAR HVPPMMGNGN RNGNVPEFGS SSSGLTLGQT NMMDGHHLLL HHQHSLLNNP  60
LDMMNQTTPE SSDLQAARIR AGDEEFDSKS GGSDNLEGTG GGSGDEQLDQ NQRKRKKRYH  120
RHTQHQIQEM ESFFKECPHP DDKQRKELGR ELGLEPLQVK FWFQNKRTQM KNQHERHENN  180
QLRAENDKLR AENIRYKEAL STASCPNCGG PTALGEMSFD EHHLRMENVR LREEIDKISG  240
IAAKYVGKPM MPYPISSPLL PPRMLDLGVG HLGIHSQSGS AGGEIFGSSD DLIRSLASGH  300
NDLDKSVVVE LAVAAMEELV QLSQLGEPIW VQRVNGEFTE TLNEEEYVRT FPRGIGSKPF  360
GFKTEASRDS ALVIMNCMSL VESLMDANQW MNLFSGIVSR AVIIEILSTG VAGNSNGALQ  420
LMTGEFQVAS PLVPTRESLF VRYCKQQGES TWAVVDVSLD HLRSNNPIRF RRRPSGCIIQ  480
DMPNGYSKVT WVEHVEVDDR AVHELYKPLV NSTIAFGAKR WLAVLDRQCE RLASAMASNI  540
PAGEIGVITT PDGRKMMLKL AERMATSFCA GVGASSSHTW TIISGNGADD VRVMTRKSVD  600
DPGRPPGIVL NAATSFWIPV PPKRIFDFLR HENSRSEWDI LSNGGIVEEI AHIANGRDPG  660
NCVSLLRVNQ STNSSQSNML ILQESCTEAT GSFVIYAPVD IQSMNDVING GNPDNVALLP  720
SGFAILPDGP ITHHGDGQVE HGQGGSLLTV AFQILVDSVP TAKLALGSVA TVNSLITCTV  780
DRIKAAVTDE NA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113117RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein