PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026422087.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 756aa    MW: 83193 Da    PI: 6.0508
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026422087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81.1e-1980136157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k+
  XP_026422087.1  80 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 136
                     678899************************************************995 PP
2START203.87.2e-642744951206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++elv++ +++ep Wv+ +     e +n++e++++f+++ +     +++ea+r+s++v+m+++ lve+l+d + qW + +     +a +
  XP_026422087.1 274 ELAVAAMEELVQLSQLGEPIWVQRVngeftETLNEEEYVRTFPRGIGskpfgFKTEASRDSALVIMNCMSLVESLMDAN-QWMNLFSgivsRAVI 367
                     57899***************************************999********************************.*****999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     +e +s+g      galqlm+ e+q+ splvp R+++fvRy++q+g+ +w++vdvS+d+ ++++     +R +++pSg++i++++ng+skvtwveh
  XP_026422087.1 368 IEILSTGvagnsnGALQLMTGEFQVASPLVPtRESLFVRYCKQQGESTWAVVDVSLDHLRSNNP----IRFRRRPSGCIIQDMPNGYSKVTWVEH 458
                     *************************************************************997....*************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r +h+l+++lv+s++a+gak+w+a l+rqce+
  XP_026422087.1 459 VEVDDRAVHELYKPLVNSTIAFGAKRWLAVLDRQCER 495
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MFHTNMMDGH HLLLHHQHSL LNNPLDMMNQ TTPESSDLQA ARIRAGDEEF DSKSGGSDNL  60
EGTGGGSGDE QLDQNQRKRK KRYHRHTQHQ IQEMESFFKE CPHPDDKQRK ELGRELGLEP  120
LQVKFWFQNK RTQMKNQHER HENNQLRAEN DKLRAENIRY KEALSTASCP NCGGPTALGE  180
MSFDEHHLRM ENVRLREEID KISGIAAKYV GKPMMPYPIS SPLLPPRMLD LGVGHLGIHS  240
QSGSAGGEIF GSSDDLIRSL ASGHNDLDKS VVVELAVAAM EELVQLSQLG EPIWVQRVNG  300
EFTETLNEEE YVRTFPRGIG SKPFGFKTEA SRDSALVIMN CMSLVESLMD ANQWMNLFSG  360
IVSRAVIIEI LSTGVAGNSN GALQLMTGEF QVASPLVPTR ESLFVRYCKQ QGESTWAVVD  420
VSLDHLRSNN PIRFRRRPSG CIIQDMPNGY SKVTWVEHVE VDDRAVHELY KPLVNSTIAF  480
GAKRWLAVLD RQCERLASAM ASNIPAGEIG VITTPDGRKM MLKLAERMAT SFCAGVGASS  540
SHTWTIISGN GADDVRVMTR KSVDDPGRPP GIVLNAATSF WIPVPPKRIF DFLRHENSRS  600
EWDILSNGGI VEEIAHIANG RDPGNCVSLL RVNQSTNSSQ SNMLILQESC TEATGSFVIY  660
APVDIQSMND VINGGNPDNV ALLPSGFAIL PDGPITHHGD GQVEHGQGGS LLTVAFQILV  720
DSVPTAKLAL GSVATVNSLI TCTVDRIKAA VTDENA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17781RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein