PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422366.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 502aa MW: 55255.5 Da PI: 6.7003

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.8e-13	23	67	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + G+++W+ Ia+++ +t qc+ rw++yl XP_026422366.1 23 TWTQQEDDILREQISINGTENWAIIANKFK-DKTTRQCRRRWYTYL 67 6**************************9.***********97 PP
2	Myb_DNA-binding	41.2	3.7e-13	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd l +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_026422366.1 73 KGGWSPEEDMVLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 116 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MKHQETRNLK SESAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR 60 RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFTTLCKK 120 RAKHETILKE NKSLCTNPNN KRVLFQNGLV TDGTSESTAP LKKMRTNISD VAENCDHEGR 180 LLGLCGTTDA QQLRPPFAVI FPKSHGVDNL PTQQHVSNTI SVTSTDVGKS NGQATFLKRN 240 DPRITVLMQQ AELLSSLAAK VNSEGNNQSL DNAWKELQDF LNRNHKSNQL QSELPDTDFH 300 LEGLKELIED LRSNTFGGHL HWRQQDLHEE SSGSSGNSTE STLQSSAGEK IELPQGEVCS 360 LYQATGVEPQ SITLLESDGT GGEDGFLCSG VANVGAGNNA DAGGSEEFHT GTVVTQVGLL 420 ASSAEPKGTD QLVPAMSNAE FSSPVKVTPL FRSFGAAIPT PLFSESERNF LLKTFGSASS 480 PPNPSSNHSQ PPPCKRSLLQ SL

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MKHQETRNLK SESAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR  60
RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFTTLCKK  120
RAKHETILKE NKSLCTNPNN KRVLFQNGLV TDGTSESTAP LKKMRTNISD VAENCDHEGR  180
LLGLCGTTDA QQLRPPFAVI FPKSHGVDNL PTQQHVSNTI SVTSTDVGKS NGQATFLKRN  240
DPRITVLMQQ AELLSSLAAK VNSEGNNQSL DNAWKELQDF LNRNHKSNQL QSELPDTDFH  300
LEGLKELIED LRSNTFGGHL HWRQQDLHEE SSGSSGNSTE STLQSSAGEK IELPQGEVCS  360
LYQATGVEPQ SITLLESDGT GGEDGFLCSG VANVGAGNNA DAGGSEEFHT GTVVTQVGLL  420
ASSAEPKGTD QLVPAMSNAE FSSPVKVTPL FRSFGAAIPT PLFSESERNF LLKTFGSASS  480
PPNPSSNHSQ PPPCKRSLLQ SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-147	MYB family protein