PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026422428.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 312aa    MW: 35880.7 Da    PI: 4.7895
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026422428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.46e-1977130356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t +q+e Le+ Fe +++++ e++ +LAk lgL+ rqV +WFqNrRa++k
  XP_026422428.1  77 KKRRLTVNQVEFLERSFEVENKLQPERKVQLAKDLGLQPRQVAIWFQNRRARWK 130
                     56689************************************************9 PP
2HD-ZIP_I/II124.84e-4076165190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     ekkrrl+ +qv++LE+sFe e+kL+perKv+la++Lglqprqva+WFqnrRAR+ktk lEkdy++Lk++yd+lk + e+L ke+e+L++e
  XP_026422428.1  76 EKKRRLTVNQVEFLERSFEVENKLQPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKSLEKDYDSLKASYDTLKINYENLLKETEKLKTE 165
                     69*************************************************************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MLLQNQRISS SSTVDNNNLV IPSSSSSAAA AFPGSRSMVN FSDANGINFS GKSFFRSFDY  60
EENGDEDFNE YFRQPEKKRR LTVNQVEFLE RSFEVENKLQ PERKVQLAKD LGLQPRQVAI  120
WFQNRRARWK TKSLEKDYDS LKASYDTLKI NYENLLKETE KLKTEALTLT NQHLLHEKEM  180
DNSESLHLIE QCHTRTQKFI PVEVFGERPL DVASIVCKQE SFNSSNSDVV DTDSPHYING  240
LHSSALLMEP ANSSHVFEVD QSDLSQDEDE NFSRNVLPAM YNFSKPEEPN PPANSCNYGF  300
LAEDQPVWFW SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-38HD-ZIP family protein