PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026422538.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 357aa    MW: 38896.2 Da    PI: 6.6927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026422538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-13105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_026422538.1 105 PWTEEEHRLFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 149
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RGGVKLFGVR LTDGSCMKKS ASMGNLSSHY GSNSSNNASP  60
NNLHNSSSPD HNNHSIPEGY VSDDPAHTSC SSNCRGAAER KKGTPWTEEE HRLFLLGLQK  120
LGKGDWRGIA RNYVVSRTPT QVASHAQKYF IRQSNATRRK RRSSLFDMVP DMSDTPAVPE  180
EEPFFVESEM GETDNVKSLP SLNLSLDHVC EQMETTCNET SPSVEAIEEE TAACNNFTPI  240
PIFFPAYIPL QYPFWQPNLG SPSTEEEQCG NETTISNHRV LKPTPILGTD RVNVDELGMS  300
KLTLGGGSGI GGTRMEPSPL SMELLGAPSR QSAFHVSRPA TASDLGKNSE GNAIHAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.12e-80MYB_related family protein