PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422751.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 191aa MW: 21628.1 Da PI: 9.9882

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.1	2.1e-42	71	147	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C+adl++ak+yhrrhkvCe hska+vvl++gl+qrfCqqCsrfhe+sefDe+krsCrrrLa+hnerrrk+++ XP_026422751.1 71 CQVEKCKADLTDAKTYHRRHKVCELHSKASVVLLAGLHQRFCQQCSRFHEVSEFDESKRSCRRRLAGHNERRRKSSS 147 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MDSKKHNDGF KTKEGFTQKT AKDLLVEDDE EEVGLGLGCT SDKKRKGKRS CSNEGIGVSS 60 SSPSPFSSPF CQVEKCKADL TDAKTYHRRH KVCELHSKAS VVLLAGLHQR FCQQCSRFHE 120 VSEFDESKRS CRRRLAGHNE RRRKSSSESN GEVSSQQGKN PQLEENHRRP TGETKKVQIT 180 HPRNAKHFQS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	4e-36	SBP family protein