PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423122.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 189aa    MW: 22229.1 Da    PI: 9.2694
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.67.7e-2711102191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY++Y+ ++GF++r+++ ++s+++++++ r+fvCs+eg+r++++ + +++     +r+ tr gC+a+l+v  ++ +kw+v+ ++++HnH+l+p
  XP_026423122.1  11 EFYDKYSVRMGFTIRNTRIRRSHKDNSVIGREFVCSREGFRAKKHLNrENR--IlpPRPITREGCNAMLRVAVKNGSKWVVSGFVKDHNHDLNP 102
                     6******************************************99982333..2459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEFETSEDAR EFYDKYSVRM GFTIRNTRIR RSHKDNSVIG REFVCSREGF RAKKHLNREN  60
RILPPRPITR EGCNAMLRVA VKNGSKWVVS GFVKDHNHDL NPTKVPPRRL HRSVFTEDDK  120
DKKIRELSTE LQRERRRCAS YQEQLHLILK DIEEHTQHLS LAVESIVTNV TELESDELDC  180
SQGNNQIIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-50FAR1 family protein