PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423299.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 249aa MW: 28659.9 Da PI: 6.2377

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+ ++ ++G g+W++ ++ g+ R++k+c++rw +yl XP_026423299.1 14 KGPWTVEEDQILITYISRHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	47.9	3.1e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E+e ++ ++++lG++ W++Ia++++ gRt++++k+ w+++l XP_026423299.1 67 RGNFSRQEEETIIMLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MVRAPCCEKM GLKKGPWTVE EDQILITYIS RHGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SRQEEETIIM LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLYKQN 120 QTNPAAEHYA MDIAKSESNP TGESNSSKLE DQNYVHLSPQ HSSSEFSSST EFSDANADNH 180 INENTNMDEN IWSQAFSTED FKTNEDYPAI TTDPYFQVPS PMLSTTTYGS TVEYTDFWYK 240 LLMEAGELL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	4e-75	MYB family protein