PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423706.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 196aa    MW: 20908.6 Da    PI: 4.6627
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26043.11.3e-13388188
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGa.snvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
                    +C aC   +r+C+++C la+++ +   + ++ v+  FG  +n ++l++a   ++re+a+++l+ eA +r +dPv G++gv ++   +l+
  XP_026423706.1  3 SCLACTRIGRDCPENCLLAKHINSV--EVMQTVEGHFGSlANFIRLVEA-GASNREKAAQTLLHEATCRKKDPVLGVLGVARRAGAHLK 88
                    6********************6555..5778888889953788888877.8899*************************9987666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MTSCLACTRI GRDCPENCLL AKHINSVEVM QTVEGHFGSL ANFIRLVEAG ASNREKAAQT  60
LLHEATCRKK DPVLGVLGVA RRAGAHLKTV YLASTQPATS PLAVERPVNQ GSSSNIDTVA  120
GQFPSTDDLP GSSVTAEMDE LIAAAAAEVP KNAGLEAFIS AAARDPTVPI EELSRFIDIT  180
EKEVWDIINE ENPNQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30340.16e-09LBD family protein