PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423718.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 210aa MW: 22784.7 Da PI: 8.1735

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.7	1.4e-45	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ XP_026423718.1 8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPNQREDAVNSLAYEADMRLRDPVYGCVGVISILQHQLRQLQMDLS 102 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_026423718.1 103 CAKSE 107 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MASSSNSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGASNVT KLLNELHPNQ 60 REDAVNSLAY EADMRLRDPV YGCVGVISIL QHQLRQLQMD LSCAKSELSK YQNVGITGAA 120 AHGLFAAAAA AAHPQMGIGL LTGRDPTHHH HHHQFFSRDP HQQSLRSFDG NGVYDASGLV 180 AAMNVSSTIG QLGQFHQPRT AGGDDRIGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-75	LBD family protein