PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423930.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family WRKY
Protein Properties Length: 196aa    MW: 22974.4 Da    PI: 8.9272
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.75.4e-24562158
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                    +dD+y+WrKYG   v g+++prsYYrC  ++C + k+v+rs+edp+++++tY+ +H++
  XP_026423930.1  5 VDDEYSWRKYGMNYVFGARYPRSYYRCKLQRCLALKQVQRSEEDPSTFVVTYRRRHTC 62
                    59******************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDGPVDDEYS WRKYGMNYVF GARYPRSYYR CKLQRCLALK QVQRSEEDPS TFVVTYRRRH  60
TCIQFSNRHD QLDEKRQRRS LDTVINFQTG CHVKTEESGE EKVVLKSPSL SFPSAPLPTP  120
TLSIERDKNS SSMTTDNHSL HLTNEYKVIL VFHLMDRSLL ILFNYQVVLI KTVIIFLLIV  180
EIISIRCDVQ RTSLSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-24WRKY family protein