PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424089.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 199aa    MW: 22460.4 Da    PI: 5.156
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.66.8e-18959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ie+  +r+v f+kRr+g++KKA  L+ L++a+++++++s+ g+ y +ss
  XP_026424089.1  9 KKIEDRKKRNVAFTKRRHGLFKKAADLCQLTGADISLLVISPGGNPYSFSS 59
                    68*******************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MGKRRIEIKK IEDRKKRNVA FTKRRHGLFK KAADLCQLTG ADISLLVISP GGNPYSFSSS  60
SISLNDLHYR LSNAINVKEE KVADDETTRV TDDGFWWNNL NPEEIDSIEK LTAVRNQLLD  120
VKEKVAQRKQ ELLAAAAKPI DIATSTSTTT TCTVVEKMKE DSSLLEDDLG MLLSDCYDDA  180
QNWLPSIESL HNFESWLLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317KRRIEIKKIEDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.13e-11M-type_MADS family protein