PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424198.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 193aa    MW: 21273.1 Da    PI: 9.929
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.79.8e-1421991297
                    HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                      +rl +p +f+++++g    + + +l+++sg  W+vk++ + k+g+  + kGW +F++a+ L++gDfv+ k++g+s+f  vv+++
  XP_026424198.1 21 G-KRLKVPVNFIRNFNGM--IPYDSILRSPSGC-WNVKVR-EEKDGGLSFWKGWPDFAEAHCLQAGDFVTMKYIGNSQF--VVTLY 99
                    3.4699******998544..56778999*9996.*****3.5566669999*************************999..88776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MGAPQNYSRP SFFKVMIGDF GKRLKVPVNF IRNFNGMIPY DSILRSPSGC WNVKVREEKD  60
GGLSFWKGWP DFAEAHCLQA GDFVTMKYIG NSQFVVTLYG NNGCEKVSSP TGSNGVKSIP  120
SRKRKECGET SKRQFTNSGS GFDQHKYHAG DTGGDSLSSG KKKCELFKCD ARKRKATVIE  180
GRTGANQTEC SLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161175KKKCELFKCDARKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.19e-14B3 family protein