PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424463.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 247aa MW: 28074.7 Da PI: 9.8209

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.7e-06	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H XP_026424463.1 91 FVCEVCDKGFQREQNLQLHRRGH 113 89*******************88 PP
2	zf-C2H2	10.6	0.0017	201	219	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsrk+n+ +H + XP_026424463.1 201 DCGTHFSRKDNFITHKAFC 219 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MFPETFSNST SLSGEVSAGS SHGNYNTATR LQDLSPILFS YFDTDHHHHE QKQQSEEITK 60 MRKKKNRPGN PDPDAEVVAL SPKTITATNR FVCEVCDKGF QREQNLQLHR RGHNLPWKLK 120 QTSNNTDVMR KKKRVYVCPE VSCIYHQPSR ALGDLTGIKK HFLRKHGEKN WKSELCSKKY 180 AVQSDWKART KRCGTKEHRC DCGTHFSRKD NFITHKAFCD AFADESAGLV SSSSASNLGK 240 YAIVTPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	5e-94	C2H2 family protein