PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424624.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 376aa MW: 42158.6 Da PI: 4.8306

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103.6	1.6e-32	142	236	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 + r+w+ee eivlL+G+id+ +k+gk+p +d ++fyef+k+si+++v+k+ql++Kir+ K +++++++k ksg+ +f+k+h +k++elsk+iW XP_026424624.1 142 KTARVWTEEGEIVLLKGMIDY-MKQGKNPISDSNGFYEFIKGSINVDVTKEQLSSKIRHAKGRYRQNEAKEKSGEVLTFTKSHFEKCYELSKSIW 235 678****************.899******************************************************************** PP DUF573 97 g 97 g XP_026424624.1 236 G 236 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MTLKNHSPLP ENPPSVSSSS ASEDEREVEE EVVNNKEEES DDSEEEEEEG GDDDEETEKS 60 RFCVVPNSKP KSKDAEEEES SDDDSESDEQ IPIEKEEAVK KPEQTSIPSK RPVAKRQVEA 120 EKSSKRRKKN NDANAGEESE KKTARVWTEE GEIVLLKGMI DYMKQGKNPI SDSNGFYEFI 180 KGSINVDVTK EQLSSKIRHA KGRYRQNEAK EKSGEVLTFT KSHFEKCYEL SKSIWGAENK 240 PENDGKGKKG GETIEVDGAT NGKSKKKKAS NDAGVSEKRE ESVKVGDVDG KLKATVEKEE 300 VEGSGLIELA QHMAPPGLKS FLNRRGFQLL EPSKRKAFEK RWKDLQVAEG ELFLRRIDLV 360 REFSLKALEA LKSQTS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MTLKNHSPLP ENPPSVSSSS ASEDEREVEE EVVNNKEEES DDSEEEEEEG GDDDEETEKS  60
RFCVVPNSKP KSKDAEEEES SDDDSESDEQ IPIEKEEAVK KPEQTSIPSK RPVAKRQVEA  120
EKSSKRRKKN NDANAGEESE KKTARVWTEE GEIVLLKGMI DYMKQGKNPI SDSNGFYEFI  180
KGSINVDVTK EQLSSKIRHA KGRYRQNEAK EKSGEVLTFT KSHFEKCYEL SKSIWGAENK  240
PENDGKGKKG GETIEVDGAT NGKSKKKKAS NDAGVSEKRE ESVKVGDVDG KLKATVEKEE  300
VEGSGLIELA QHMAPPGLKS FLNRRGFQLL EPSKRKAFEK RWKDLQVAEG ELFLRRIDLV  360
REFSLKALEA LKSQTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	293	KKKKASNDAGVSEKREESVKVGDVDGKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	2e-26	GeBP family protein