PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424644.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 528aa    MW: 60331.8 Da    PI: 10.0135
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.25.2e-121298196
                    EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                    ffkv+     + ++ l lp +f++++ g++   + + +l+++sg  W+v+++ +  +g+  + +GW +Fv+a+ L +gDfv+ k++g+s+f   v++
  XP_026424644.1 12 FFKVM--MGDF-RKKLKLPVNFIKNFkGMV---PYDSILQSPSGC-WNVEIR-EEEDGGLSFWEGWPDFVQAHCLGQGDFVTMKYIGNSQF--AVML 98
                    67777..3444.4559*******8886656...456799999996.*****3.55556699999************************999..5555 PP
2B337.34.9e-122072831294
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     k+ r+ +p k ++++g     s  + l++ +g+ W+v+l  ++++g++++ kGWkeF +   L++g ++ ++++g+s f   v
  XP_026424644.1 207 KKYRMEIPQKVLRKIGRT--LSDIVALKSANGKLWNVEL--KRSGGKVWFYKGWKEFTEHLSLRDGYVLGISYNGNSHFD--V 283
                     67799**********855..8889***************..********************************9999884..3 PP
3B352.68.1e-17427520299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     f v ++  +l+   l +p +fa++h  k+   k +++++++ r+W++ +  + ++++  l +GW +  ++ +L egD++vF+l + +++e++v+v
  XP_026424644.1 427 FAVCMRDTYLTYPYLHIPYNFANKHLRKT-I-KNVVVRNSEDRVWTLGY--WMGDSSAQLCSGWTSLRRDLRLTEGDVCVFELLKGKDTEMRVSV 517
                     5666667777777899*********5443.3.47***************..99999999***********************9999********* PP

                     E-S CS
              B3  97 frk 99 
                     frk
  XP_026424644.1 518 FRK 520
                     *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MGSLQNYSRP SFFKVMMGDF RKKLKLPVNF IKNFKGMVPY DSILQSPSGC WNVEIREEED  60
GGLSFWEGWP DFVQAHCLGQ GDFVTMKYIG NSQFAVMLYG KNGCEKVLPS STGNNGVKSI  120
PSRKRKEYGE TSKRQFTNSG SGFDQHKYHA GDTGGDSLSS GKKKCALFKC GALKRKSTLI  180
EGRIRVDQEE CSGKGKPCFR FFWTENKKYR MEIPQKVLRK IGRTLSDIVA LKSANGKLWN  240
VELKRSGGKV WFYKGWKEFT EHLSLRDGYV LGISYNGNSH FDVRITNYMD DSVNQGDSNP  300
KKRCRLSKRE EDDDVIRLDS PPSRPHVESK TYEERAQLSV PPGFNTPMQL NKNKGAKSLV  360
SDETRCVGNE RTPSGYRLPV VKEVKSEDTS DSPEASRHLQ KLSWRAGKER VAEVTKLFKP  420
QTHSPFFAVC MRDTYLTYPY LHIPYNFANK HLRKTIKNVV VRNSEDRVWT LGYWMGDSSA  480
QLCSGWTSLR RDLRLTEGDV CVFELLKGKD TEMRVSVFRK IDNVLTRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-33B3 family protein