PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424645.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 492aa MW: 56094.7 Da PI: 9.7339

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.4	4.4e-12	171	247	12	94
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 k+ r+ +p k ++++g s + l++ +g+ W+v+l ++++g++++ kGWkeF + L++g ++ ++++g+s f v XP_026424645.1 171 KKYRMEIPQKVLRKIGRT--LSDIVALKSANGKLWNVEL--KRSGGKVWFYKGWKEFTEHLSLRDGYVLGISYNGNSHFD--V 247 67799********855..8889***********..******************************9999884..3 PP
2	B3	52.8	7.2e-17	390	484	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ff v ++ +l+ l +p +fa++h k+ k +++++++ r+W++ + + ++++ l +GW + ++ +L egD++vF+l + +++e++v+ XP_026424645.1 390 FFAVCMRDTYLTYPYLHIPYNFANKHLRKT-I-KNVVVRNSEDRVWTLGY--WMGDSSAQLCSGWTSLRRDLRLTEGDVCVFELLKGKDTEMRVS 480 55666667777777899*******5443.3.47***********..99999999*******************9999**** PP EE-S CS B3 96 vfrk 99 vfrk XP_026424645.1 481 VFRK 484 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MVPYDSILQS PSGCWNVEIR EEEDGGLSFW EGWPDFVQAH CLGQGDFVTM KYIGNSQFAV 60 MLYGKNGCEK VLPSSTGNNG VKSIPSRKRK EYGETSKRQF TNSGSGFDQH KYHAGDTGGD 120 SLSSGKKKCA LFKCGALKRK STLIEGRIRV DQEECSGKGK PCFRFFWTEN KKYRMEIPQK 180 VLRKIGRTLS DIVALKSANG KLWNVELKRS GGKVWFYKGW KEFTEHLSLR DGYVLGISYN 240 GNSHFDVRIT NYMDDSVNQG DSNPKKRCRL SKREEDDDVI RLDSPPSRPH VESKTYEERA 300 QLSVPPGFNT PMQLNKNKGA KSLVSDETRC VGNERTPSGY RLPVVKEVKS EDTSDSPEAS 360 RHLQKLSWRA GKERVAEVTK LFKPQTHSPF FAVCMRDTYL TYPYLHIPYN FANKHLRKTI 420 KNVVVRNSED RVWTLGYWMG DSSAQLCSGW TSLRRDLRLT EGDVCVFELL KGKDTEMRVS 480 VFRKIDNVLT RI

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MVPYDSILQS PSGCWNVEIR EEEDGGLSFW EGWPDFVQAH CLGQGDFVTM KYIGNSQFAV  60
MLYGKNGCEK VLPSSTGNNG VKSIPSRKRK EYGETSKRQF TNSGSGFDQH KYHAGDTGGD  120
SLSSGKKKCA LFKCGALKRK STLIEGRIRV DQEECSGKGK PCFRFFWTEN KKYRMEIPQK  180
VLRKIGRTLS DIVALKSANG KLWNVELKRS GGKVWFYKGW KEFTEHLSLR DGYVLGISYN  240
GNSHFDVRIT NYMDDSVNQG DSNPKKRCRL SKREEDDDVI RLDSPPSRPH VESKTYEERA  300
QLSVPPGFNT PMQLNKNKGA KSLVSDETRC VGNERTPSGY RLPVVKEVKS EDTSDSPEAS  360
RHLQKLSWRA GKERVAEVTK LFKPQTHSPF FAVCMRDTYL TYPYLHIPYN FANKHLRKTI  420
KNVVVRNSED RVWTLGYWMG DSSAQLCSGW TSLRRDLRLT EGDVCVFELL KGKDTEMRVS  480
VFRKIDNVLT RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-33	B3 family protein