PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425061.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 485aa    MW: 55838.9 Da    PI: 9.9713
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.88e-13891794
                    .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                     ++++k +rl l k+f+ ++g  ke s   +++ ++g  W + l  +k  g +++++GW eF +   +++g ++ F++dg+sef+l++
  XP_026425061.1  8 DASSNKDNRLELTKEFTVKYG--KELSDHAIIKVPNGGIWHIGL--SKAEGVILFENGWPEFMEFYSICVGHVIFFRYDGNSEFQLHI 91
                    567888899***********9..4588899**************..**************************************7776 PP
2B3543e-17206301499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++ + k++ +++p  f++ + + + + + +tl  ++gr+Wev +     + +    l+kGW +F  +n+L+egD++vF+l++r++ +++v++
  XP_026425061.1 206 LILQATHIKRN-VIVPIAFTSLF-LRNITRMVITLSISDGRTWEVGYVSrtYNEKTNSKLSKGWCKFLADNHLNEGDVCVFELVDREKIKMNVQF 298
                     55566666776.78888888555.3444668899999**********764433333478************************************ PP

                     E-S CS
              B3  97 frk 99 
                     fr+
  XP_026425061.1 299 FRQ 301
                     *97 PP
3B375.46.4e-24336432199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f kv +++++ +++++++p  fa++h ++  +++ +tl+ ++gr+Wev++ +++++++ vl++GW +Fv +n+LkegD+ vF+l++r++ +++v+
  XP_026425061.1 336 FYKVVMQASYIQTHMVRVPLVFATSHFKNI-TQMVITLRVSDGRTWEVRY-VSRSPKQKVLSQGWHKFVADNDLKEGDVYVFELVDRKNVKMLVH 428
                     77999*********************6554.5689***************.79999999************************************ PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_026425061.1 429 IFRQ 432
                     **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MHICKILDAS SNKDNRLELT KEFTVKYGKE LSDHAIIKVP NGGIWHIGLS KAEGVILFEN  60
GWPEFMEFYS ICVGHVIFFR YDGNSEFQLH IFGIDGTEID YPSHNNDNAS NEVKMTSSHL  120
DEDEVVSIHS MSRESSLNSG SSQRNYEPSM SSESSSDQKA EPVRQEFSQK RAKQRTVIPT  180
RIHTKAFKET LEAAEAFKSD NPSFKLILQA THIKRNVIVP IAFTSLFLRN ITRMVITLSI  240
SDGRTWEVGY VSRTYNEKTN SKLSKGWCKF LADNHLNEGD VCVFELVDRE KIKMNVQFFR  300
QQKAFARKIN PKIRYFTAEF KATLEAAKKF TSENPFYKVV MQASYIQTHM VRVPLVFATS  360
HFKNITQMVI TLRVSDGRTW EVRYVSRSPK QKVLSQGWHK FVADNDLKEG DVYVFELVDR  420
KNVKMLVHIF RQQKPSARKL TPKSSKYTAQ FHATLDAAET FTSQNPFFKV VMQAAHMKKG  480
MLIRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-37B3 family protein