PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425062.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 472aa MW: 54350.1 Da PI: 9.9941

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.9	7.6e-13	8	91	7	94
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++++k +rl l k+f+ ++g ke s +++ ++g W + l +k g +++++GW eF + +++g ++ F++dg+sef+l++ XP_026425062.1 8 DASSNKDNRLELTKEFTVKYG--KELSDHAIIKVPNGGIWHIGL--SKAEGVILFENGWPEFMEFYSICVGHVIFFRYDGNSEFQLHI 91 567888899*********9..4588899**********..************************************7776 PP
2	B3	54.1	2.9e-17	206	301	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++ + k++ +++p f++ + + + + + +tl ++gr+Wev + + + l+kGW +F +n+L+egD++vF+l++r++ +++v++ XP_026425062.1 206 LILQATHIKRN-VIVPIAFTSLF-LRNITRMVITLSISDGRTWEVGYVSrtYNEKTNSKLSKGWCKFLADNHLNEGDVCVFELVDREKIKMNVQF 298 55566666776.78888888555.3444668899999********764433333478********************************** PP E-S CS B3 97 frk 99 fr+ XP_026425062.1 299 FRQ 301 *97 PP
3	B3	67.6	1.7e-21	339	419	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++p fa++h ++ +++ +tl+ ++gr+Wev++ +++++++ vl++GW +Fv +n+LkegD+ vF+l++r++ +++v++fr+ XP_026425062.1 339 RVPLVFATSHFKNI-TQMVITLRVSDGRTWEVRY-VSRSPKQKVLSQGWHKFVADNDLKEGDVYVFELVDRKNVKMLVHIFRQ 419 57889999995553.5689*************.79999999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MHICKILDAS SNKDNRLELT KEFTVKYGKE LSDHAIIKVP NGGIWHIGLS KAEGVILFEN 60 GWPEFMEFYS ICVGHVIFFR YDGNSEFQLH IFGIDGTEID YPSHNNDNAS NEVKMTSSHL 120 DEDEVVSIHS MSRESSLNSG SSQRNYEPSM SSESSSDQKA EPVRQEFSQK RAKQRTVIPT 180 RIHTKAFKET LEAAEAFKSD NPSFKLILQA THIKRNVIVP IAFTSLFLRN ITRMVITLSI 240 SDGRTWEVGY VSRTYNEKTN SKLSKGWCKF LADNHLNEGD VCVFELVDRE KIKMNVQFFR 300 QQKAFARKIN PKIRYFTAEF KATLEAAKKF TSENPFYKRV PLVFATSHFK NITQMVITLR 360 VSDGRTWEVR YVSRSPKQKV LSQGWHKFVA DNDLKEGDVY VFELVDRKNV KMLVHIFRQQ 420 KPSARKLTPK SSKYTAQFHA TLDAAETFTS QNPFFKVVMQ AAHMKKGMLI RF

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MHICKILDAS SNKDNRLELT KEFTVKYGKE LSDHAIIKVP NGGIWHIGLS KAEGVILFEN  60
GWPEFMEFYS ICVGHVIFFR YDGNSEFQLH IFGIDGTEID YPSHNNDNAS NEVKMTSSHL  120
DEDEVVSIHS MSRESSLNSG SSQRNYEPSM SSESSSDQKA EPVRQEFSQK RAKQRTVIPT  180
RIHTKAFKET LEAAEAFKSD NPSFKLILQA THIKRNVIVP IAFTSLFLRN ITRMVITLSI  240
SDGRTWEVGY VSRTYNEKTN SKLSKGWCKF LADNHLNEGD VCVFELVDRE KIKMNVQFFR  300
QQKAFARKIN PKIRYFTAEF KATLEAAKKF TSENPFYKRV PLVFATSHFK NITQMVITLR  360
VSDGRTWEVR YVSRSPKQKV LSQGWHKFVA DNDLKEGDVY VFELVDRKNV KMLVHIFRQQ  420
KPSARKLTPK SSKYTAQFHA TLDAAETFTS QNPFFKVVMQ AAHMKKGMLI RF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-37	B3 family protein