PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425063.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 417aa MW: 47887.3 Da PI: 9.0388

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.2	6.2e-13	8	91	7	94
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++++k +rl l k+f+ ++g ke s +++ ++g W + l +k g +++++GW eF + +++g ++ F++dg+sef+l++ XP_026425063.1 8 DASSNKDNRLELTKEFTVKYG--KELSDHAIIKVPNGGIWHIGL--SKAEGVILFENGWPEFMEFYSICVGHVIFFRYDGNSEFQLHI 91 567888899*********9..4588899**********..************************************7776 PP
2	B3	54.4	2.3e-17	206	301	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++ + k++ +++p f++ + + + + + +tl ++gr+Wev + + + l+kGW +F +n+L+egD++vF+l++r++ +++v++ XP_026425063.1 206 LILQATHIKRN-VIVPIAFTSLF-LRNITRMVITLSISDGRTWEVGYVSrtYNEKTNSKLSKGWCKFLADNHLNEGDVCVFELVDREKIKMNVQF 298 55566666776.78888888555.3444668899999********764433333478********************************** PP E-S CS B3 97 frk 99 fr+ XP_026425063.1 299 FRQ 301 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MHICKILDAS SNKDNRLELT KEFTVKYGKE LSDHAIIKVP NGGIWHIGLS KAEGVILFEN 60 GWPEFMEFYS ICVGHVIFFR YDGNSEFQLH IFGIDGTEID YPSHNNDNAS NEVKMTSSHL 120 DEDEVVSIHS MSRESSLNSG SSQRNYEPSM SSESSSDQKA EPVRQEFSQK RAKQRTVIPT 180 RIHTKAFKET LEAAEAFKSD NPSFKLILQA THIKRNVIVP IAFTSLFLRN ITRMVITLSI 240 SDGRTWEVGY VSRTYNEKTN SKLSKGWCKF LADNHLNEGD VCVFELVDRE KIKMNVQFFR 300 QQKAFARKIN PKIRYFTAEF KATLEAAKKF TSENPFYKVV MQASYIQTHM VRVPLVFATS 360 HFKNITQMVI TLRVSDGRTW EVRYVSRSPK QKVLSQEGTC GFWNPTFDRH NTDGDHS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MHICKILDAS SNKDNRLELT KEFTVKYGKE LSDHAIIKVP NGGIWHIGLS KAEGVILFEN  60
GWPEFMEFYS ICVGHVIFFR YDGNSEFQLH IFGIDGTEID YPSHNNDNAS NEVKMTSSHL  120
DEDEVVSIHS MSRESSLNSG SSQRNYEPSM SSESSSDQKA EPVRQEFSQK RAKQRTVIPT  180
RIHTKAFKET LEAAEAFKSD NPSFKLILQA THIKRNVIVP IAFTSLFLRN ITRMVITLSI  240
SDGRTWEVGY VSRTYNEKTN SKLSKGWCKF LADNHLNEGD VCVFELVDRE KIKMNVQFFR  300
QQKAFARKIN PKIRYFTAEF KATLEAAKKF TSENPFYKVV MQASYIQTHM VRVPLVFATS  360
HFKNITQMVI TLRVSDGRTW EVRYVSRSPK QKVLSQEGTC GFWNPTFDRH NTDGDHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-37	B3 family protein