PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425099.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 386aa MW: 43339.8 Da PI: 6.2327

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++k +G+g+W++++ g+ R+ k+c++rw +yl XP_026425099.1 14 KGPWTPEEDLILASYIKDHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	44.8	2.9e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++ + +lG++ W++Ia++++ Rt++++k++w+++l XP_026425099.1 67 RGNFTELEEKMIISLQSLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGRPPCCDKV GIKKGPWTPE EDLILASYIK DHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TELEEKMIIS LQSLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFH 120 SILHPHHLGS SSSSDSSTSF QFLSKDYSSS YDRIRNLEHH HLIHQNSALN KFISSHRSSV 180 GSSNTSSTTS TISYASSTEN ISRLLEGWMK TSPNKLNTSN STTLKLKATQ TEEKVLLDGN 240 NNSKNNNHNT SHSGNNNLDD DKQLVKKVEV QESCNDDDDL ISNEADYFES LLTFENISNM 300 ACWEQKSSSD STTIHGSTTS ASPEPQTTTT TTPIEDRVDS ISESDHQGLI EDDQNQPPFS 360 LLEKWLLDEA TGQVLEEDPM ETSPIF

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGRPPCCDKV GIKKGPWTPE EDLILASYIK DHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TELEEKMIIS LQSLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFH  120
SILHPHHLGS SSSSDSSTSF QFLSKDYSSS YDRIRNLEHH HLIHQNSALN KFISSHRSSV  180
GSSNTSSTTS TISYASSTEN ISRLLEGWMK TSPNKLNTSN STTLKLKATQ TEEKVLLDGN  240
NNSKNNNHNT SHSGNNNLDD DKQLVKKVEV QESCNDDDDL ISNEADYFES LLTFENISNM  300
ACWEQKSSSD STTIHGSTTS ASPEPQTTTT TTPIEDRVDS ISESDHQGLI EDDQNQPPFS  360
LLEKWLLDEA TGQVLEEDPM ETSPIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-80	MYB family protein