PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425383.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 210aa    MW: 23576.6 Da    PI: 4.7726
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.96.5e-191059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +ie+  +r+v+f+kRr+g++KKA  L+ L++a+++++++s+ gk +++ss
  XP_026425383.1 10 KIEDRKKRNVSFTKRRQGLFKKAADLCRLTGADISLLVISPGGKPHTFSS 59
                    69**********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MGKRRIEIHK IEDRKKRNVS FTKRRQGLFK KAADLCRLTG ADISLLVISP GGKPHTFSSS  60
SSSSISLNDL NYRLSNTINV KEEKVADDET ARVSDDGFWW NNLNPEEIDS IEMLTAVRNQ  120
LLDVKEKVAQ RKQELLAAAA KPIDIATSTS TTTTCTVVEK MKEDSSLMED DLGMLLSDCY  180
DDAQNWLPSI DDSGMLFEGL DYHESWLPVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317KRRIEIHKIEDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.16e-16M-type_MADS family protein