PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425585.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 265aa MW: 30146.6 Da PI: 4.377

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.7	1.1e-19	51	105	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ +f++eq++ Le++Fe + ++ +++ LAk+lgL+ rqV +WFqNrRa++k XP_026425585.1 51 KKKKRFSDEQIKSLESMFETETKLEPKMKLLLAKELGLQPRQVAIWFQNRRARWK 105 78899*************************************************9 PP
2	HD-ZIP_I/II	123.9	7.5e-40	51	143	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kk+r+s+eq+k+LE++Fe+e+kLep+ K la+eLglqprqva+WFqnrRAR+k+kqlE+dy+ Lk++yd l+++ e+Le+e+++L ++l++ XP_026425585.1 51 KKKKRFSDEQIKSLESMFETETKLEPKMKLLLAKELGLQPRQVAIWFQNRRARWKSKQLERDYNILKASYDDLASKFENLESEKQALIKQLQK 143 59****************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MLETEEEFLL DCTTTATMET GVKVESSSSI LESSSNDTSM MMSMMRKKNN KKKKRFSDEQ 60 IKSLESMFET ETKLEPKMKL LLAKELGLQP RQVAIWFQNR RARWKSKQLE RDYNILKASY 120 DDLASKFENL ESEKQALIKQ LQKLSDLVGK PREDSSCCGL GLAGNNSSMD GDSDNGDTKY 180 KFEKKPELSV EGGDGLDFRL DPCSEDEHSK ELEYFGQDEE HDPMNIGEPT YGILSSSEDW 240 GSLDDSTGLF DQSCSGNSQW WEVWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	79	KKKKRFSDEQIKSLESMFETETKLEPKMK
2	52	80	KKKKRFSDEQIKSLESMFETETKLEPKMK
3	100	108	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-52	HD-ZIP family protein