PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425621.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 1024aa MW: 113526 Da PI: 6.8257

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.4e-28	645	695	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek isl++l++yFs+++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_026425621.1 645 EKCISLDVLQQYFSGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 695 788**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MMSCSSSPEE EEDINLKNFF SKSLNMESNN NNSRYPFMDL DSVDLDSSSW SSFDMFPLIS 60 NSFISNPFLG NQPSSSSSSS QFLLSLNTSL SPPHHNPVNP GLSIETPSSP LWVFTDFEDK 120 ASAGGGGDGG GGFLPNSSNG GFQLTNRPKF LSSNTDSMME KHLGQLGGEE GKKKLFSAEG 180 PDESCVMKER MMQALRYFKE SMETQQVLAQ VWAPVKKGDK YVLTTSGQPF VLDAHNNGLL 240 QYRTVSLMYI FNLDGESDRD LGLPGRVFRQ KLPEWTPNVQ YYSDKEYQRL NHALSYNVRG 300 TLALPVFETS GKSCIGVIEL ITTSHKVNYA PEVDKVCKAL EAVNLKTSEI MDSPSVQICN 360 EGRQNALAEI LEILTVVCET HKLPMAQTWI PCRHRSIIAH GGGVQKSCTS FDGSCMGQIC 420 MSTTDVAFYV IDPHMWGFRD ACSEHHLQNG QGVAGRAFLS LGSCFSRDIT KFSKTNYPLV 480 HYARMFDLRS SFAICLRSAY TGTDDYILEF FLPPTIIETN QQQAFLSSLF ATMKQHFRNL 540 KVASGKNLED EERSIEIIEA SVEHKCDPKL EISPVTKFPP MQNGFMNKAG GVNQSDSLEK 600 RFPVENDAKR KVEYLNTVDV NHASNSPSGT REVKKTTEKR RGKTEKCISL DVLQQYFSGS 660 LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSLS KIKRVIESVH GGEGAFDLTS 720 LTSSPLPAPV SSPSWQSDRK EQFPGSKPPI ESPRRMTPGN EEHCDTKNII EPRKGAKRSK 780 TGSSSTDDSA GTPTSHLSCQ GSPANNEVTP SKDLFVSSTQ EHGQETRRSF GLSFQPFREI 840 NLCAAYSTPD ARMTTELQRA PSGLLTKDSG SSADLRNLSN LALESYPDEK FLKSTWTNPI 900 CVTNHSSPPD TTNPAQIIHS IRTKQDVRTV SVKVSFKEAI IRFRVSLMSG LTELKEEIAK 960 RLRLEVGTFE VKYLDDDHEW VLLSCDADLL ECFDISKLSG GHVIRLLVHD AMGSFESSCE 1020 SSGD

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MMSCSSSPEE EEDINLKNFF SKSLNMESNN NNSRYPFMDL DSVDLDSSSW SSFDMFPLIS  60
NSFISNPFLG NQPSSSSSSS QFLLSLNTSL SPPHHNPVNP GLSIETPSSP LWVFTDFEDK  120
ASAGGGGDGG GGFLPNSSNG GFQLTNRPKF LSSNTDSMME KHLGQLGGEE GKKKLFSAEG  180
PDESCVMKER MMQALRYFKE SMETQQVLAQ VWAPVKKGDK YVLTTSGQPF VLDAHNNGLL  240
QYRTVSLMYI FNLDGESDRD LGLPGRVFRQ KLPEWTPNVQ YYSDKEYQRL NHALSYNVRG  300
TLALPVFETS GKSCIGVIEL ITTSHKVNYA PEVDKVCKAL EAVNLKTSEI MDSPSVQICN  360
EGRQNALAEI LEILTVVCET HKLPMAQTWI PCRHRSIIAH GGGVQKSCTS FDGSCMGQIC  420
MSTTDVAFYV IDPHMWGFRD ACSEHHLQNG QGVAGRAFLS LGSCFSRDIT KFSKTNYPLV  480
HYARMFDLRS SFAICLRSAY TGTDDYILEF FLPPTIIETN QQQAFLSSLF ATMKQHFRNL  540
KVASGKNLED EERSIEIIEA SVEHKCDPKL EISPVTKFPP MQNGFMNKAG GVNQSDSLEK  600
RFPVENDAKR KVEYLNTVDV NHASNSPSGT REVKKTTEKR RGKTEKCISL DVLQQYFSGS  660
LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSLS KIKRVIESVH GGEGAFDLTS  720
LTSSPLPAPV SSPSWQSDRK EQFPGSKPPI ESPRRMTPGN EEHCDTKNII EPRKGAKRSK  780
TGSSSTDDSA GTPTSHLSCQ GSPANNEVTP SKDLFVSSTQ EHGQETRRSF GLSFQPFREI  840
NLCAAYSTPD ARMTTELQRA PSGLLTKDSG SSADLRNLSN LALESYPDEK FLKSTWTNPI  900
CVTNHSSPPD TTNPAQIIHS IRTKQDVRTV SVKVSFKEAI IRFRVSLMSG LTELKEEIAK  960
RLRLEVGTFE VKYLDDDHEW VLLSCDADLL ECFDISKLSG GHVIRLLVHD AMGSFESSCE  1020
SSGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein