PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425630.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 313aa    MW: 35835.3 Da    PI: 7.9911
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.73.4e-2188177799
                     .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++++ k   +++p++fa+++  + ++s ++tl  ++gr+Wev + + +++ +  l++GW +Fv +n+LkegD++vF+l++r++ +++v++fr+
  XP_026425630.1  88 QASYIKA-YVRVPNDFANSYLRNITQS-EITLGISDGRTWEVGYVF-RTPTESRLSRGWCRFVADNHLKEGDVCVFELVDREKIQMTVHIFRQ 177
                     5555554.4899********4444555.9***************76.4445557*************************************97 PP
2B3696.6e-22211307198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                     ffkv +++ + ++g +++p  fa++h  ++  +++ +tl+ ++gr+Wev +   + + gr  + +GW eFv +n+LkegD++vF+l++r ++fe+
  XP_026425630.1 211 FFKVVMHNAYINRGTVTVPAVFATSHlTNI--KQMVITLRVSDGRTWEVLYVSqTPTNGR--ICQGWGEFVADNNLKEGDVCVFELIDRrKNFEM 301
                     99************************6333..6799***************653444444..667**********************888***** PP

                     EEEEE- CS
              B3  93 vvkvfr 98 
                      v +fr
  XP_026425630.1 302 DVYIFR 307
                     ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTSTHSDDDE VEVVSIHSGS TQSNYEPSMT SESPLNQKAE PGGHKFSQES QKQRTFVPTR  60
SHSKAFQAAI KAADAFRSEN PFYRVIMQAS YIKAYVRVPN DFANSYLRNI TQSEITLGIS  120
DGRTWEVGYV FRTPTESRLS RGWCRFVADN HLKEGDVCVF ELVDREKIQM TVHIFRQQKR  180
FARNTPEIKN YAAGFQATLE AAKEFTSENP FFKVVMHNAY INRGTVTVPA VFATSHLTNI  240
KQMVITLRVS DGRTWEVLYV SQTPTNGRIC QGWGEFVADN NLKEGDVCVF ELIDRRKNFE  300
MDVYIFRLKY SID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.15e-18B3 family protein