PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425763.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 310aa MW: 35168.1 Da PI: 9.4129

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.4	1.2e-11	40	84	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 rWT+eE +++ +a +q+ ++ +W +Ia +++ g+t +++ + XP_026425763.1 40 RWTQEENKRFENALAQYDKDtpdRWQKIALMIP-GKTVNDVMKQYK 84 9******************************.*****98876 PP
2	Myb_DNA-binding	43.1	9.9e-14	142	186	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + kq+G+g+W+ I+r + Rt+ q+ s+ qky XP_026425763.1 142 PWTEDEHRLFLLGLKQYGKGDWRNISRNFVVSRTPTQVASHAQKY 186 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MMKWGMEILS PQSYLPVSNW LLEENNNGNN NNHSNNKSTR WTQEENKRFE NALAQYDKDT 60 PDRWQKIALM IPGKTVNDVM KQYKELEDDV GYIEAGLVPI PGYTTSSFTL DWVNSRSFDG 120 SNGGKRSSST RPGDQERKKG VPWTEDEHRL FLLGLKQYGK GDWRNISRNF VVSRTPTQVA 180 SHAQKYFIRQ LSGGKDKRRS SIHDITTVNL ADNRPPSPDS TTSTIDQSTM LTQQPNQNSA 240 PKALFDWNQP HDMVFNPAHG SLYVPPTYGI NSFGMKMQGH NLNRNSLHGS HMGAHNAMFQ 300 MQSSQCHPHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	1e-102	MYB family protein