PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425768.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 217aa    MW: 23915.3 Da    PI: 7.3703
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-072377654
                    HHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-.STCHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.as....kapskK.lsKaeiLekAveYIksL 54
                    + +E++RR++++   ++L +l+P+  s    + +skK    ++   +A +YI++L
  XP_026425768.1 23 KTIEKNRRSHMKAVCFKLVSLIPPtTSthdnNHSSKKdIAQMDLIDQAANYIQEL 77
                    679*********************555***99999999***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MKNSSKYASS STTCAAAAAV DRKTIEKNRR SHMKAVCFKL VSLIPPTTST HDNNHSSKKD  60
IAQMDLIDQA ANYIQELTKR IDKLKRKKDL LTATTLPNTD HCGDQDIITT NAAAVVAASF  120
TCSLNTSTEI CGNDLLDLPI LQVRIFDSTT LEVVLITGMN KQFLYYQLIT VLEEEGSEIV  180
NASFATVDDK IFYTVDSQVR AGADTSRICD RLKKLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-17bHLH family protein