PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425769.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 378aa MW: 43481.2 Da PI: 7.8681

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	8.1e-06	70	91	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF + +Lk+H+ +H XP_026425769.1 70 TCQECGASFQKPAHLKQHMLSH 91 6*******************99 PP
2	zf-C2H2	17.9	8.5e-06	97	121	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H XP_026425769.1 97 FTCPvdDCHSSYRRKDHLNRHLLQH 121 89*******************9887 PP
3	zf-C2H2	15.7	4.3e-05	126	148	1	21
EEET..TTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHir 21 ++Cp C+k+F k n+krH XP_026425769.1 126 FSCPveGCNKRFAYKANMKRHVE 148 89*******************86 PP
4	zf-C2H2	17.6	1.1e-05	167	191	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cgk+F+ s L++H +H XP_026425769.1 167 HICQevGCGKVFKYASKLRKHEESH 191 679999***************9988 PP
5	zf-C2H2	15.4	5.5e-05	258	282	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ dC +F +ksnL++H ++ H XP_026425769.1 258 KCSfkDCECTFANKSNLNQHVKSvH 282 79999*****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEKMEEEQGG VVEKKEKPRD IRRFYCEFCG ICRSKKSLIA SHLQTHHKKE TEMNMDGIDE 60 QEEAKSSNNT CQECGASFQK PAHLKQHMLS HSLERPFTCP VDDCHSSYRR KDHLNRHLLQ 120 HQGKLFSCPV EGCNKRFAYK ANMKRHVEDI HEDEDTSSSD SQGQTQHICQ EVGCGKVFKY 180 ASKLRKHEES HVKLESVEAI CCEPGCMKYF ANNDCLKAHV QSCHQHVLCE VCGTKQLKKN 240 MKRHMRGHEN EGSSERIKCS FKDCECTFAN KSNLNQHVKS VHLELRPFAC QFPGCGQRFA 300 FKHVRDNHEK SGCHIYVHGD FEEADEQLQT RPRGGRKRTC PTVETLLRKR VVPPSHTDSV 360 LNHAPEYLAW LLSAEGDC

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEKMEEEQGG VVEKKEKPRD IRRFYCEFCG ICRSKKSLIA SHLQTHHKKE TEMNMDGIDE  60
QEEAKSSNNT CQECGASFQK PAHLKQHMLS HSLERPFTCP VDDCHSSYRR KDHLNRHLLQ  120
HQGKLFSCPV EGCNKRFAYK ANMKRHVEDI HEDEDTSSSD SQGQTQHICQ EVGCGKVFKY  180
ASKLRKHEES HVKLESVEAI CCEPGCMKYF ANNDCLKAHV QSCHQHVLCE VCGTKQLKKN  240
MKRHMRGHEN EGSSERIKCS FKDCECTFAN KSNLNQHVKS VHLELRPFAC QFPGCGQRFA  300
FKHVRDNHEK SGCHIYVHGD FEEADEQLQT RPRGGRKRTC PTVETLLRKR VVPPSHTDSV  360
LNHAPEYLAW LLSAEGDC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	243	LKKNMKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-112	C2H2 family protein