PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426124.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 287aa    MW: 31539 Da    PI: 4.919
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding461.2e-143781147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I  ++g  +t  q++s+ qky
   XP_026426124.1 37 RENWTDEEHDKFLEALQLFDRD-WKKIEDYVG-SKTVIQIRSHAQKY 81
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MNSSSSSSSS PQSMATSTSS DLAGKKIRKP YTITKSRENW TDEEHDKFLE ALQLFDRDWK  60
KIEDYVGSKT VIQIRSHAQK YFLKVQKNGT IAHVPPPRPK RKAVHPYPHK ASRNAFEPLQ  120
GSEDYPSILS SFAAGNSIWD ETSVILSSAS NESELSPDDY TVIHGDGDDI GLKEVVSIGS  180
SGISVMGSSS RIPDIQKQVI PDFAEVYGFI GSVFDPDTNG HMQKLKDMDP INFETVLLLM  240
RNLTLNLSNP EFGTVRNALS SYDGDTEAGD TDAGDIAMDS NQNHLSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.18e-88MYB_related family protein