PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426140.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 527aa MW: 60011.7 Da PI: 9.6512

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.7	3.4e-17	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle+Le+++ ++ yp+++++++ Akk+gL+e+qV+ WF+ rR k+k+ XP_026426140.1 29 KQKRKFKTPAQLEALENFYTEHTYPNEKMKADFAKKVGLSEKQVSGWFCHRRLKDKR 85 6799999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MEEAGHNLMK NSEPCEVHHE EDNALPENKQ KRKFKTPAQL EALENFYTEH TYPNEKMKAD 60 FAKKVGLSEK QVSGWFCHRR LKDKRLLKEA SANGKQDLSS GVIQDRGSGL KQDSCSSNKQ 120 GSYRYFDLKE VESRRFDGPD YATPDRPYSK RGVRMPTGIY STAENTSSGS SSTSHERLFP 180 HKGGRGTHDM ENLRYPNRSS NSMLISEGVK NKGKALVSGY LHLRDEIENA AIISVKKQLG 240 RLFCEDGPPL GIEFQSLPPG AFDSPVRNQV NDTYQMAGPV RQNSHGISKG RKESRIEMRY 300 PRNHHETYPQ GSYPDGEHIK RTKSEYVRRE RTTYPSLGNS FFNSDRKHAP EGIPSMDMRE 360 SSEDEPPVIN SKNNFRRSKY GVEGMVSNNN GNPRVRPSLS KFSSGEPSDL QLHKYDYPRA 420 RMLKRKEYLE PKPLNLVNQH KEAFDSVDGE ENVHRDWRTK DYANHVRAKK SLKNDMKVGR 480 RVRADFPSRA PGSNELLPCR NRTKEHIGDG QTSFYEDAAA ETSSSMD

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MEEAGHNLMK NSEPCEVHHE EDNALPENKQ KRKFKTPAQL EALENFYTEH TYPNEKMKAD  60
FAKKVGLSEK QVSGWFCHRR LKDKRLLKEA SANGKQDLSS GVIQDRGSGL KQDSCSSNKQ  120
GSYRYFDLKE VESRRFDGPD YATPDRPYSK RGVRMPTGIY STAENTSSGS SSTSHERLFP  180
HKGGRGTHDM ENLRYPNRSS NSMLISEGVK NKGKALVSGY LHLRDEIENA AIISVKKQLG  240
RLFCEDGPPL GIEFQSLPPG AFDSPVRNQV NDTYQMAGPV RQNSHGISKG RKESRIEMRY  300
PRNHHETYPQ GSYPDGEHIK RTKSEYVRRE RTTYPSLGNS FFNSDRKHAP EGIPSMDMRE  360
SSEDEPPVIN SKNNFRRSKY GVEGMVSNNN GNPRVRPSLS KFSSGEPSDL QLHKYDYPRA  420
RMLKRKEYLE PKPLNLVNQH KEAFDSVDGE ENVHRDWRTK DYANHVRAKK SLKNDMKVGR  480
RVRADFPSRA PGSNELLPCR NRTKEHIGDG QTSFYEDAAA ETSSSMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-55	HB-other family protein