PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426141.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 518aa MW: 59058.6 Da PI: 9.592

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.8	3.3e-17	20	76	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle+Le+++ ++ yp+++++++ Akk+gL+e+qV+ WF+ rR k+k+ XP_026426141.1 20 KQKRKFKTPAQLEALENFYTEHTYPNEKMKADFAKKVGLSEKQVSGWFCHRRLKDKR 76 6799999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MEEEPCEVHH EEDNALPENK QKRKFKTPAQ LEALENFYTE HTYPNEKMKA DFAKKVGLSE 60 KQVSGWFCHR RLKDKRLLKE ASANGKQDLS SGVIQDRGSG LKQDSCSSNK QGSYRYFDLK 120 EVESRRFDGP DYATPDRPYS KRGVRMPTGI YSTAENTSSG SSSTSHERLF PHKGGRGTHD 180 MENLRYPNRS SNSMLISEGV KNKGKALVSG YLHLRDEIEN AAIISVKKQL GRLFCEDGPP 240 LGIEFQSLPP GAFDSPVRNQ VNDTYQMAGP VRQNSHGISK GRKESRIEMR YPRNHHETYP 300 QGSYPDGEHI KRTKSEYVRR ERTTYPSLGN SFFNSDRKHA PEGIPSMDMR ESSEDEPPVI 360 NSKNNFRRSK YGVEGMVSNN NGNPRVRPSL SKFSSGEPSD LQLHKYDYPR ARMLKRKEYL 420 EPKPLNLVNQ HKEAFDSVDG EENVHRDWRT KDYANHVRAK KSLKNDMKVG RRVRADFPSR 480 APGSNELLPC RNRTKEHIGD GQTSFYEDAA AETSSSMD

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MEEEPCEVHH EEDNALPENK QKRKFKTPAQ LEALENFYTE HTYPNEKMKA DFAKKVGLSE  60
KQVSGWFCHR RLKDKRLLKE ASANGKQDLS SGVIQDRGSG LKQDSCSSNK QGSYRYFDLK  120
EVESRRFDGP DYATPDRPYS KRGVRMPTGI YSTAENTSSG SSSTSHERLF PHKGGRGTHD  180
MENLRYPNRS SNSMLISEGV KNKGKALVSG YLHLRDEIEN AAIISVKKQL GRLFCEDGPP  240
LGIEFQSLPP GAFDSPVRNQ VNDTYQMAGP VRQNSHGISK GRKESRIEMR YPRNHHETYP  300
QGSYPDGEHI KRTKSEYVRR ERTTYPSLGN SFFNSDRKHA PEGIPSMDMR ESSEDEPPVI  360
NSKNNFRRSK YGVEGMVSNN NGNPRVRPSL SKFSSGEPSD LQLHKYDYPR ARMLKRKEYL  420
EPKPLNLVNQ HKEAFDSVDG EENVHRDWRT KDYANHVRAK KSLKNDMKVG RRVRADFPSR  480
APGSNELLPC RNRTKEHIGD GQTSFYEDAA AETSSSMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	6e-55	HB-other family protein