PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426209.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 826aa    MW: 91822.1 Da    PI: 6.9037
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.61.2e-1244628182374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lLl+cAe vs+g+  +a+a+L ++sel++p g++ qR+aayf eA++arl++s  +ly+ l+  +t+   s+++++a+++f+ +sP++kfsh+
  XP_026426209.1 462 LTLLLQCAESVSTGNIDEANAMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSEIRLYAPLSNGPTH---SQKVASAFQVFNGISPFVKFSHF 553
                     579***************************************************999***999999998...99999****************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     taNqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s ++le+tg+rL++fAe+lg+pfef + +a+++ +l++
  XP_026426209.1 554 TANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SIDALEATGKRLTDFAETLGLPFEFIP-IAEKVGNLDI 643
                     *****************************************************....9**************************.7********* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L+v+++Ea+aV++ +  h+l+d ++s ++    +L l+++l Pkvv++veq+++h +++Fl rf+ea++yysa+fdsl a++++eseer+ vE
  XP_026426209.1 644 ERLNVSKREAVAVHWLH--HSLYDVTGSDNN----TLFLLQRLAPKVVTMVEQDLSH-AGTFLGRFVEAIHYYSAMFDSLGASYGEESEERHIVE 731
                     ****************9..999999999999....**********************.899********************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ll+rei+nv+a  g +r+ +++ +++Wre+l+++GF+ ++l  +aa+qa lll +++ dgy++ e++g+l lgWkd  L+++SaWr
  XP_026426209.1 732 QQLLSREIKNVLAVGGPSRTGETK-FQNWREKLKQSGFRGMSLAGNAATQATLLLGMFPCDGYTLLEDNGTLKLGWKDLYLLTASAWR 818
                     ******************888776.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 826 aa     Download sequence    
MAACVLLNNN NNGSSNGNSS RIGGASGNSN SNSEDKNNSF TSSMQQQPQQ QDPKMVRKRT  60
ASEMEVQPDN NNNNQRISRR PNNSFTEIGR AASMGYHPHH HPNPNANNIV SSSDNNNTNL  120
NPNNNNITIT IPSNHSTSTT TTSNILPSPS LNSLTSFNFP SSNFTYLDHH QHHSNVVLPS  180
SPLLPSLPAV CNFSGLPLFP SEQENRIVHQ NITSSSAAAQ MEENNNNSAT TAWIDGIIKD  240
LINTTTNVSV PQLIQNVREI IFPSNPNLAT LLEFRLRSLM VEPVLDHHQQ QQQHNINTDN  300
RRKEVTGYQR QQQHHHQQIP LSPFPLSDHP SSSALPQIPS NNNHFLNWSL PNPSAQDLNQ  360
QLHHHPQQQN PIPSHMPPKH HYHHQQQQQQ QQPQPKPSPP PPQQQQQIPS PPQQQQSSPQ  420
SVPATTTTTP TTPSPSVTQI IARDRREEMR QQKRDEDGLH LLTLLLQCAE SVSTGNIDEA  480
NAMLLEISEL STPFGTSAQR VAAYFSEAMS ARLVSSEIRL YAPLSNGPTH SQKVASAFQV  540
FNGISPFVKF SHFTANQAIQ EAFEREDRVH IIDLDIMQGL QWPGLFHILA SRPGGPPFVR  600
LTGLGTSIDA LEATGKRLTD FAETLGLPFE FIPIAEKVGN LDIERLNVSK REAVAVHWLH  660
HSLYDVTGSD NNTLFLLQRL APKVVTMVEQ DLSHAGTFLG RFVEAIHYYS AMFDSLGASY  720
GEESEERHIV EQQLLSREIK NVLAVGGPSR TGETKFQNWR EKLKQSGFRG MSLAGNAATQ  780
ATLLLGMFPC DGYTLLEDNG TLKLGWKDLY LLTASAWRPI HSNIHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein