PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426469.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 218aa    MW: 24034.4 Da    PI: 8.7313
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.3e-072377653
                    HHHHHHHHHHHHHHHHHHHCTSCC.C........TTS-.STCHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.as.....kapskK.lsKaeiLekAveYIks 53
                    + +E++RR++++s  ++L +l+P+  s     + +skK     +   +A +YI++
  XP_026426469.1 23 KTIEKNRRSHMKSLCFKLVSLIPPtTSthdnnNHSSKKdIAQTDLIDQAANYIQE 77
                    679*********************555****98888888999999********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MKNLSKFASS SSSTCAAAAV DRKTIEKNRR SHMKSLCFKL VSLIPPTTST HDNNNHSSKK  60
DIAQTDLIDQ AANYIQEVTK RIDKLKRKKD LLTATTLPNT DHCGDQDIIT TNAAAVVAPT  120
STCSLNTSTE RAGNSLLDLP ILQVRNFDST TLEVVFITGI NKHFLYYQLI TVLEEEGAEV  180
VNASFATVVD KIFYTVHSQV RAGVETSRIC DRLKKLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-18bHLH family protein