PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427053.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 331aa MW: 37617.5 Da PI: 6.4592

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ede+l ++v++ G g+W+t +++ g+ R++k+c++rw +yl XP_026427053.1 32 RGPWTPDEDEILSNYVQKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 79 89****************************99**********97 PP
2	Myb_DNA-binding	48.3	2.3e-15	86	130	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_026427053.1 86 GQIGEDEEDLILRLHHLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 130 556699*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MASSSSSVWK NSTTNKSSST KTPCCTKVGL KRGPWTPDED EILSNYVQKE GEGRWRTLPK 60 RAGLLRCGKS CRLRWMNYLR PSVKRGQIGE DEEDLILRLH HLLGNRWSLI AGRIPGRTDN 120 EIKNYWNTHL SKKLISQGID PRTHKPLTNP DPNNHYHEPP PPLFEHTSIS NPKFIHTGHD 180 DSSTSAISSL EMSFSEAIDD KGNDNNRHEY LKGITTLNAD QNHYNLENSD GFMMGFRDME 240 EDLHHHTEFN NDDVFSSFFN SLINDDVYVH QHQQPQQHPT TAKNQVPLLD YTTPVDSSST 300 QSFGYSDVIM ESAYSSPNIT NGNAFNQEML G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-74	MYB family protein