PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427319.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 357aa MW: 39526.5 Da PI: 5.3672

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.9e-18	185	239	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_026427319.1 185 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 239 788899***********************************************98 PP
2	HD-ZIP_I/II	128.8	2.2e-41	185	275	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_026427319.1 185 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 275 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MELGLSLGDT SRPFGCTTDK NRSKMMKNNK GLGFCMALGV GYNGRDEDED EEEEGDDEKS 60 SDEQRTDNDN NDSGRKVSSA DPIQLNLLPL VPVTRNQTGF PWSSENDAGS RGFDVNRIPA 120 SAEELDDGAA ISSPNSTVSS FQIDFSMYRN GGNSKRDSEI AGLNDGDNER TSSRASDEEE 180 NGLARKKLRL SKEQSAFLEE SFKEHNTLNP KQKVALAKQL NLRPRQVEVW FQNRRARTKL 240 KQTEVDCEYL KRCCETLTEE NRRLQKELQE LRALKTSNPY YMQLPATTLT MCPSCERVAT 300 TTTNSGSTAA AAATAPPTTT TTAPTTATTN IQNSNPFSHK KPRFYPFSQP HHASAAS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MELGLSLGDT SRPFGCTTDK NRSKMMKNNK GLGFCMALGV GYNGRDEDED EEEEGDDEKS  60
SDEQRTDNDN NDSGRKVSSA DPIQLNLLPL VPVTRNQTGF PWSSENDAGS RGFDVNRIPA  120
SAEELDDGAA ISSPNSTVSS FQIDFSMYRN GGNSKRDSEI AGLNDGDNER TSSRASDEEE  180
NGLARKKLRL SKEQSAFLEE SFKEHNTLNP KQKVALAKQL NLRPRQVEVW FQNRRARTKL  240
KQTEVDCEYL KRCCETLTEE NRRLQKELQE LRALKTSNPY YMQLPATTLT MCPSCERVAT  300
TTTNSGSTAA AAATAPPTTT TTAPTTATTN IQNSNPFSHK KPRFYPFSQP HHASAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	242	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-93	HD-ZIP family protein