PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427345.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 234aa MW: 27274.3 Da PI: 7.5481

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.2	1e-09	25	72	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +WT + d+l+ +a+ ++ + +W Ia++++ g+t+ q+ ++q + XP_026427345.1 25 SWTRQQDKLFEQAIVIFPDEndphRWQQIANCVP-GKTASQVYQHYQVL 72 5***************99**********.**********86 PP
2	Myb_DNA-binding	45.6	1.7e-14	130	174	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + +++G+g+W++I+r ++Rt+ q+ s+ qky XP_026427345.1 130 PWTEEEHRAFLYGLEKFGKGDWRSISRNAVQTRTPTQVASHAQKY 174 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MFQENISMNI YNNQFQSQSQ SPSYSWTRQQ DKLFEQAIVI FPDENDPHRW QQIANCVPGK 60 TASQVYQHYQ VLVRDIQDIE EGRVELPSYY DDVDDNKVIW ETESSPPPLP GTMNNNKTKQ 120 TESERKKGVP WTEEEHRAFL YGLEKFGKGD WRSISRNAVQ TRTPTQVASH AQKYFLRLNA 180 EKKERKRSSI HDITTVEKAS KVSSKPSDCP VQQMRTMDNL IGTYPRQGDY FGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-60	MYB family protein