PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427483.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 459aa    MW: 50614.1 Da    PI: 5.6135
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.31.4e-110924563374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96 
                      lLl+cAe +s ++l +a+ lL ++s+l+sp g++ +R+a+yf +AL++r+ + + ++y+ l + ++ + ++s++  +al+ ++ +sP++kfsh+
  XP_026427483.1  92 GLLLKCAESISMDNLDEASDLLPEISQLSSPFGTSPERVASYFGQALQSRIISCCIGTYSPLdSDKSLNLNQSQKICNALQSYNSISPLIKFSHF 186
                     58************************************************************4445556666999999***************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     taNqaI +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++  s+RiTg+gs    s  +l++tg+rL++fA++lg+pfefn+l  k  + ++
  XP_026427483.1 187 TANQAIFQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIRSMRITGIGS----SMLMLQATGKRLSDFASSLGLPFEFNPLEGKVGNIID 277
                     ****************************************55667*********....***************************999999999* PP

            GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     l++L+ ++ gE+++V++++  h l++ ++s       +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l  +l+ +s +r+ 
  XP_026427483.1 278 LSRLSPRQgGETTIVHWMH--HCLYNVTGSDLG----TLSLLKILRPKLITIVEQDSSH-GGNFLGRFVEALHYYSALFDALGDGLSGDSIDRHQ 365
                     *******99*********9..777767888777....9*********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                     vE++l+g ei+n+va  g +r+ + + + +W + l++ GFk+v+l+ + a+qa+lll +++++gy++   ee gsl lgWkd +L+++SaW+
  XP_026427483.1 366 VEQQLFGVEIRNIVAVGGPKRTGEVK-VDRWGDELRRIGFKSVSLGGNPAAQANLLLGMFPWKGYTLVedEETGSLKLGWKDLSLLTASAWQ 456
                     ********************998887.9**************************************99445589999**************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MIQSCSSNFL YHQSSSSEYA AAAANSVKTH KRMNQNDDEL SIFNNGSDQS DDQNPPRKKQ  60
NFEEQGRMMV TDNQSNTAQS DDDESSGLRL LGLLLKCAES ISMDNLDEAS DLLPEISQLS  120
SPFGTSPERV ASYFGQALQS RIISCCIGTY SPLDSDKSLN LNQSQKICNA LQSYNSISPL  180
IKFSHFTANQ AIFQALEGED RIHIIDLDIM QGLQWPGLFH ILASRSKKKI RSMRITGIGS  240
SMLMLQATGK RLSDFASSLG LPFEFNPLEG KVGNIIDLSR LSPRQGGETT IVHWMHHCLY  300
NVTGSDLGTL SLLKILRPKL ITIVEQDSSH GGNFLGRFVE ALHYYSALFD ALGDGLSGDS  360
IDRHQVEQQL FGVEIRNIVA VGGPKRTGEV KVDRWGDELR RIGFKSVSLG GNPAAQANLL  420
LGMFPWKGYT LVEDEETGSL KLGWKDLSLL TASAWQLLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-169GRAS family protein