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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_026427483.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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| Family | GRAS | ||||||||
| Protein Properties | Length: 459aa MW: 50614.1 Da PI: 5.6135 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 361.3 | 1.4e-110 | 92 | 456 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96
lLl+cAe +s ++l +a+ lL ++s+l+sp g++ +R+a+yf +AL++r+ + + ++y+ l + ++ + ++s++ +al+ ++ +sP++kfsh+
XP_026427483.1 92 GLLLKCAESISMDNLDEASDLLPEISQLSSPFGTSPERVASYFGQALQSRIISCCIGTYSPLdSDKSLNLNQSQKICNALQSYNSISPLIKFSHF 186
58************************************************************4445556666999999***************** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
taNqaI +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++ s+RiTg+gs s +l++tg+rL++fA++lg+pfefn+l k + ++
XP_026427483.1 187 TANQAIFQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIRSMRITGIGS----SMLMLQATGKRLSDFASSLGLPFEFNPLEGKVGNIID 277
****************************************55667*********....***************************999999999* PP
GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
l++L+ ++ gE+++V++++ h l++ ++s +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l +l+ +s +r+
XP_026427483.1 278 LSRLSPRQgGETTIVHWMH--HCLYNVTGSDLG----TLSLLKILRPKLITIVEQDSSH-GGNFLGRFVEALHYYSALFDALGDGLSGDSIDRHQ 365
*******99*********9..777767888777....9*********************.789******************************** PP
GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
vE++l+g ei+n+va g +r+ + + + +W + l++ GFk+v+l+ + a+qa+lll +++++gy++ ee gsl lgWkd +L+++SaW+
XP_026427483.1 366 VEQQLFGVEIRNIVAVGGPKRTGEVK-VDRWGDELRRIGFKSVSLGGNPAAQANLLLGMFPWKGYTLVedEETGSLKLGWKDLSLLTASAWQ 456
********************998887.9**************************************99445589999**************6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 459 aa Download sequence |
MIQSCSSNFL YHQSSSSEYA AAAANSVKTH KRMNQNDDEL SIFNNGSDQS DDQNPPRKKQ 60 NFEEQGRMMV TDNQSNTAQS DDDESSGLRL LGLLLKCAES ISMDNLDEAS DLLPEISQLS 120 SPFGTSPERV ASYFGQALQS RIISCCIGTY SPLDSDKSLN LNQSQKICNA LQSYNSISPL 180 IKFSHFTANQ AIFQALEGED RIHIIDLDIM QGLQWPGLFH ILASRSKKKI RSMRITGIGS 240 SMLMLQATGK RLSDFASSLG LPFEFNPLEG KVGNIIDLSR LSPRQGGETT IVHWMHHCLY 300 NVTGSDLGTL SLLKILRPKL ITIVEQDSSH GGNFLGRFVE ALHYYSALFD ALGDGLSGDS 360 IDRHQVEQQL FGVEIRNIVA VGGPKRTGEV KVDRWGDELR RIGFKSVSLG GNPAAQANLL 420 LGMFPWKGYT LVEDEETGSL KLGWKDLSLL TASAWQLLE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G41920.1 | 1e-169 | GRAS family protein | ||||




