PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427540.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 432aa MW: 48015.8 Da PI: 5.0211

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.8	8.5e-18	100	189	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ + l +p kf++++++k e++ +tl de+g++ k+ ++++ l++GW++Fv +++L egD vvF+l++ ++f +v XP_026427540.1 100 FVKLMVKSHVSGEFSLGIPSKFCAKFMLK--EDISMTLLDEEGKEHIAKY--LAGKCG--LSAGWRGFVIDHKLVEGDPVVFQLIEINKF--KVY 186 89**********************999..5667***********..666666..9*********************987888..787 PP EE- CS B3 96 vfr 98 ++r XP_026427540.1 187 IVR 189 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MDTQESAAAE DDVLRIKNSM ETEEEDDDGM ALTHFSHPSA IASSNPKSQI TTVTVADSVK 60 ESTESENRSL KVENGKAKLL DPIERAEEFR SSLDPKFPSF VKLMVKSHVS GEFSLGIPSK 120 FCAKFMLKED ISMTLLDEEG KEHIAKYLAG KCGLSAGWRG FVIDHKLVEG DPVVFQLIEI 180 NKFKVYIVRT IGLGEVDSAF GHLQLEACAQ KSSLGIFAGH LLLIVLSVSI ELQTVGICLM 240 FKLGKAGDDT KPTRNTVVGK PKRLPLPVAD QPKNCSEEAD SENVEGIRFA SSVPEFEDIK 300 NVESFNIIYN DLIIDSEMSK HVRSRYYKLC CSQNSFLHKN LVPGLNCKLV AGMICETVNI 360 SDAIQSSQVR STSRDVLQLW RKSLEAFEHL DMNVGFLLPR LDELVRLASE SEQAVDLKRD 420 REAINERKLA EE

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MDTQESAAAE DDVLRIKNSM ETEEEDDDGM ALTHFSHPSA IASSNPKSQI TTVTVADSVK  60
ESTESENRSL KVENGKAKLL DPIERAEEFR SSLDPKFPSF VKLMVKSHVS GEFSLGIPSK  120
FCAKFMLKED ISMTLLDEEG KEHIAKYLAG KCGLSAGWRG FVIDHKLVEG DPVVFQLIEI  180
NKFKVYIVRT IGLGEVDSAF GHLQLEACAQ KSSLGIFAGH LLLIVLSVSI ELQTVGICLM  240
FKLGKAGDDT KPTRNTVVGK PKRLPLPVAD QPKNCSEEAD SENVEGIRFA SSVPEFEDIK  300
NVESFNIIYN DLIIDSEMSK HVRSRYYKLC CSQNSFLHKN LVPGLNCKLV AGMICETVNI  360
SDAIQSSQVR STSRDVLQLW RKSLEAFEHL DMNVGFLLPR LDELVRLASE SEQAVDLKRD  420
REAINERKLA EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-38	B3 family protein