PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427609.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 418aa    MW: 46926.8 Da    PI: 10.0565
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.42.6e-13146235198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v +    v+  +f+++  ++ + + +++lede+g ++e  +i    +  + +++GW+ F+ +++L++gD vvF+  +++ ++++v 
  XP_026427609.1 146 FVKSMLRSHVYSCF-WVFQPNFVKATFQN-QLKLDMVLEDEEGLEYEAVYI--PER--TGISGGWRAFALDHKLDDGDAVVFE--RTEAARFKVY 232
                     88999999999765.888999*9888545.36679***************4..433..4499*********************..4477777999 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_026427609.1 233 IFK 235
                     997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MAKGTCDNNS YEEARKQRLE ENKKRFEDLG IAKITKTLSE FTKMGKESPG KKQVKPRSRT  60
APTSPDSLRR SSRPRSTAIS YQEEYTDHSL LTKRSRSRVR SSSASSSSYI ARPLEEIKVA  120
TRKERCAALK CAESFESNLQ SKHPSFVKSM LRSHVYSCFW VFQPNFVKAT FQNQLKLDMV  180
LEDEEGLEYE AVYIPERTGI SGGWRAFALD HKLDDGDAVV FERTEAARFK VYIFKGSNGG  240
GKVNAKEMKR ATESKTLKLQ KVKKSDENDE DADDNMSKEK DALEAKARGK KARKSEKVIK  300
SDTDNCASEE ELMELTGDGG RKARSSKKLR KSGTNADMGE EDLVQISKQQ RTTRNSKKAE  360
DCDISGVRKI ENSVKAAEPA KEINGSVSRR LQLGRHSKRV AKTGAEEGKT TELVDVAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398KRSRSR
2290331KKARKSEKVIKSDTDNCASEEELMELTGDGGRKARSSKKLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-46B3 family protein