PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427650.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 272aa MW: 31436.2 Da PI: 6.5142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_026427650.1 12 KGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 59 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.8e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_026427650.1 65 RGRMTPQEERLVLELHSRWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 110 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MKMVQTEDHI RKGPWTEQED LQLVCFVGLF GDRRWDFIAK VSGLNRTGKS CRLRWVNYLH 60 PGLKRGRMTP QEERLVLELH SRWGNRWSRI ARKIPGRTDN EIKNYWRTHM RKKAQEMRKR 120 GTAMTSIASS STITTMTESP TKSENVPGIR NRFPGNEGSC NTTDIDVNGE RDISEEEDYS 180 MDRIWDEIAS PEDEVNSGQF FDERSNSTNN NKEVGCSFPC PPMASPLWEL GSESLWKIDD 240 EDEMKMLVHM GGTGDHFNST MNTVDNHKLC FH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	3e-79	MYB family protein