PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427654.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 205aa    MW: 23523 Da    PI: 4.9051
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.9e-16243548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_026427654.1  2 TPQEERLVLELHSRWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 43
                     9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTPQEERLVL ELHSRWGNRW SRIARKIPGR TDNEIKNYWR THMRKKAQEM RKRGTAMTSI  60
ASSSTITTMT ESPTKSENVP GIRNRFPGNE GSCNTTDIDV NGERDISEEE DYSMDRIWDE  120
IASPEDEVNS GQFFDERSNS TNNNKEVGCS FPCPPMASPL WELGSESLWK IDDEDEMKML  180
VHMGGTGDHF NSTMNTVDNH KLCFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.12e-36MYB_related family protein