PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427776.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 420aa MW: 46392.7 Da PI: 10.1315

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	62	1.5e-19	98	188	5	98
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 r+w ++Dei+lL ++ d+ k g + af+ef++ + s++v q+ +Kir+ K+ + +k+k+ k+g +f+++h ++++elsk iWgs XP_026427776.1 98 RVWKDKDEILLLTAIADY-VKIGE--NPNSVAFCEFIQPKFSVDVDFGQIRSKIRHTKDTYLEKEKEEKKGIVLKFKTPHHKECYELSKPIWGS 188 9***************.55554..56889***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDVRKSPRLP KNSSTASPFS STGLKLKPTS TASPSSSSSS SSSSSPSSTP NHNKQTNKLI 60 STSFIPPKLK STPVSTTTTE KSHAVEAEKP KKKNNGGRVW KDKDEILLLT AIADYVKIGE 120 NPNSVAFCEF IQPKFSVDVD FGQIRSKIRH TKDTYLEKEK EEKKGIVLKF KTPHHKECYE 180 LSKPIWGSGG EGSETAGVEN EDDAEIRKSK RGKKMKAGSM IQTKDGNATG ANEQLEEVDA 240 VVEKAATVEK RQHRKDGAEG SEAADQANKK KQGKKVGDKK HGKAGAGDVE AKADGQEEGK 300 KKKRTEVEKE RSKKKKKKRT EVGNADNVLE KLKPTADKQQ ECLCQLMTHQ CKEQLTKAPF 360 DLESSLNEKI LQSIEPSKVM AYQQKWKEMR IAEMELFLKK NDLVREGSLL VLEALKAPPS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDVRKSPRLP KNSSTASPFS STGLKLKPTS TASPSSSSSS SSSSSPSSTP NHNKQTNKLI  60
STSFIPPKLK STPVSTTTTE KSHAVEAEKP KKKNNGGRVW KDKDEILLLT AIADYVKIGE  120
NPNSVAFCEF IQPKFSVDVD FGQIRSKIRH TKDTYLEKEK EEKKGIVLKF KTPHHKECYE  180
LSKPIWGSGG EGSETAGVEN EDDAEIRKSK RGKKMKAGSM IQTKDGNATG ANEQLEEVDA  240
VVEKAATVEK RQHRKDGAEG SEAADQANKK KQGKKVGDKK HGKAGAGDVE AKADGQEEGK  300
KKKRTEVEKE RSKKKKKKRT EVGNADNVLE KLKPTADKQQ ECLCQLMTHQ CKEQLTKAPF  360
DLESSLNEKI LQSIEPSKVM AYQQKWKEMR IAEMELFLKK NDLVREGSLL VLEALKAPPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	319	KKKKRTEVEKERSKKKKKKR
2	301	320	KKKKRTEVEKERSKKKKKKR
3	302	321	KKKKRTEVEKERSKKKKKKR
4	310	316	ERSKKKK
5	313	319	KKKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	4e-11	GeBP family protein