PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428062.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 346aa MW: 40639.1 Da PI: 4.5799

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.6	3e-33	15	175	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Ptdeel+ +yLk+k+ ++kl+ ++i++ d+yk++P +L + k +++++ewyfF+++ ++++t r++r+t +g+W at dke++ XP_026428062.1 15 LPPGFRFKPTDEELLLDYLKPKLMNQKLPP-NMINSYDLYKYNPITLTEtfKKRKDDDEWYFFTTTTRTSQTTGRTSRTTPEGFWLATQGDKEIT 108 79***********************999.89**********85234445677********************************* PP NAM 94 skkgel...................vglkktLvfy.............kgrapkgektdWvmheyrl 128 ++g++ +g +k+Lv+y + ++ g ktdW+m ey l XP_026428062.1 109 LTRGRVdhqenpnsrkrktttndniIGYRKMLVYYfnkknkpdgsrktSSKKDAGDKTDWIMYEYVL 175 9944444555666677777888888******999888877766557888899*******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MSSGVEDEVN LNMMLPPGFR FKPTDEELLL DYLKPKLMNQ KLPPNMINSY DLYKYNPITL 60 TETFKKRKDD DEWYFFTTTT RTSQTTGRTS RTTPEGFWLA TQGDKEITLT RGRVDHQENP 120 NSRKRKTTTN DNIIGYRKML VYYFNKKNKP DGSRKTSSKK DAGDKTDWIM YEYVLLCYDT 180 HEGGDVSSKK RHELVLCQIH NSRKTPPPSA PMTTSSPPKF SSPITQEPEV EAATVHHQQN 240 EYLPVQDQQY EYLPVQDQQD EYLPVQDQQY ENLPVQDQQE EHLPVQDQLN KYLPVQDQQE 300 EYLPVQHQQE DYVDMILENN KDLINQLDDQ EWSFSIDDFN LDDLVV

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MSSGVEDEVN LNMMLPPGFR FKPTDEELLL DYLKPKLMNQ KLPPNMINSY DLYKYNPITL  60
TETFKKRKDD DEWYFFTTTT RTSQTTGRTS RTTPEGFWLA TQGDKEITLT RGRVDHQENP  120
NSRKRKTTTN DNIIGYRKML VYYFNKKNKP DGSRKTSSKK DAGDKTDWIM YEYVLLCYDT  180
HEGGDVSSKK RHELVLCQIH NSRKTPPPSA PMTTSSPPKF SSPITQEPEV EAATVHHQQN  240
EYLPVQDQQY EYLPVQDQQD EYLPVQDQQY ENLPVQDQQE EHLPVQDQLN KYLPVQDQQE  300
EYLPVQHQQE DYVDMILENN KDLINQLDDQ EWSFSIDDFN LDDLVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	127	SRKRKT
2	123	149	RKRKTTTNDNIIGYRKMLVYYFNKKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-23	NAC family protein