PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428095.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 185aa MW: 21099.1 Da PI: 9.957

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	77.5	1e-24	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k i+n nrq+t+skR+ gilKKA+EL +LC+a+v++i+fs++gk+ ey XP_026428095.1 9 KYIKNPLNRQITYSKRKSGILKKANELTILCNAQVCLIMFSKSGKIAEYV 58 579**********************************************7 PP
2	K-box	39.5	2.3e-14	72	142	2	71
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllG.edLesLslkeLqqLeqqLekslkkiRskKne 71 ++++++l+ea++e lq+el+ ++ + +++e+R++ G ++L++Ls eL+ Le++L++sl +R++K e XP_026428095.1 72 RRKTNTNLWEAQYEALQEELRAQQDIGSRIKKEIRQRTGgDGLSELSCGELRVLEEDLHQSLGIVRNRKAE 142 5678889***************************985378*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MGRGKIEIKY IKNPLNRQIT YSKRKSGILK KANELTILCN AQVCLIMFSK SGKIAEYVSP 60 ATTIKDILDR YRRKTNTNLW EAQYEALQEE LRAQQDIGSR IKKEIRQRTG GDGLSELSCG 120 ELRVLEEDLH QSLGIVRNRK AEREKQESRL IAVPAGNDGD DQPHFTTLQM FTNWFPTATK 180 PSQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	3e-42	MIKC_MADS family protein