PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428098.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 150aa MW: 17368.1 Da PI: 8.4797

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84.3	7.5e-27	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien+ nrqvt++kRr gi+KKA+ L +LCda+v+vi+fs+tgkl+ y XP_026428098.1 9 KFIENTPNRQVTYCKRRSGIMKKANDLTILCDAQVCVIMFSNTGKLHVYV 58 79*********************************************996 PP
2	K-box	38.5	4.9e-14	71	146	1	75
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellle 75 yq+ + ++ +ea+ e l++el+ ++ + L++e+R++ G+ dL++ s++eL Le++L + lk R++K +++ + XP_026428098.1 71 YQRETCTDIWEAELEALEEELKTQQEIGSRLKKEIRQRTGQdDLSEFSIEELGGLEKDLARCLKILRERKVNVMSS 146 78888999******************************637****************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
MGRAKIEIKF IENTPNRQVT YCKRRSGIMK KANDLTILCD AQVCVIMFSN TGKLHVYVSP 60 SNTLKKFFDR YQRETCTDIW EAELEALEEE LKTQQEIGSR LKKEIRQRTG QDDLSEFSIE 120 ELGGLEKDLA RCLKILRERK VNVMSSAMLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	5e-38	MIKC_MADS family protein