PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428182.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 231aa MW: 25999 Da PI: 8.567

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00015	49	99	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54 +++E++RR +++ ++L +l + s K + L A eYIk+L XP_026428182.1 49 KIVEKNRRIQMKALCFKLVSLTTPKStiDYILDISPKTDQLDDAAEYIKEL 99 789****************998543544444567999********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVELAFPCQY FMLSPNYNSQ ASAFLLGFSL LSTKRKMKSC KKSDTLERKI VEKNRRIQMK 60 ALCFKLVSLT TPKSTIDYIL DISPKTDQLD DAAEYIKELR KRIDDLQRNK NEMNHGGEQE 120 YISTNSISSS CSSSSTSTMT DKNLSGATLP ILEVKDFETA MVVLVVTGLN KNFMLYQLIT 180 VLEEHGAEVV NASFPTVNDK IFHTIHSQVR CSRLGVDTSK ICEGLKKLVY A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	1e-20	bHLH family protein