PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428235.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 477aa    MW: 54640.7 Da    PI: 9.3418
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.83.3e-12351081895
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     lpk+f++++g  +e s   +++ ++g  W + l  r+  g +++++GW eF +   +++g +++F++dg+sef+l++ 
  XP_026428235.1  35 LPKEFTDKCG--TELSDNAIIKVPNGGIWHIGL--RNAEGVILFQSGWPEFMEFYSICVGHVLLFRYDGNSEFQLHIF 108
                     9********8..4588899**************..**************************************77764 PP
2B366.53.9e-212733531799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++p  fa++h  +  + + +tl+ ++gr+We+++ +++++++ vl++GW +Fv +n+LkegD++vF+l++r++ +++v++f +
  XP_026428235.1 273 RVPLAFATSHFTNI-TRMVITLMVSDGRTWELRY-VSRSPKQKVLSQGWHKFVADNNLKEGDVCVFELVDRKNIKMLVHIFGQ 353
                     68999*****5553.5589***************.79999999*************************************976 PP
3B3598.2e-19388471186
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     ffkv +++ + k+g +++p  fa++h   +  + + +tl+ ++ ++Wev + +++++ +  ++ GW+eFv +ngLkegD++vF+l++
  XP_026428235.1 388 FFKVAMQAAHIKKGTMTVPAVFATQHlTDI--TRMVITLKVSDEKTWEVHY-VSGTPTEKRISLGWREFVADNGLKEGDVCVFELVD 471
                     99************************6333..5689***************.6777777789999*******************874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MISTFPNDFH ISGTKQLCCY AADQMARRQP EFQELPKEFT DKCGTELSDN AIIKVPNGGI  60
WHIGLRNAEG VILFQSGWPE FMEFYSICVG HVLLFRYDGN SEFQLHIFGI DATEIEYPSH  120
ANENANNEVE MTSTHMDEDE VVSIHSGERQ EFSQKTAKQR TVIPTRIHTK AFKETLEAAE  180
AFKSDNPSFK LILQALHFKG TVKVPIAFTS LFLRNVTRMM ITLSISDGRT WEVGYIMKNR  240
KKINPKIRYH AAQFKAMREA VRKFTSENPF YKRVPLAFAT SHFTNITRMV ITLMVSDGRT  300
WELRYVSRSP KQKVLSQGWH KFVADNNLKE GDVCVFELVD RKNIKMLVHI FGQQKPSARK  360
PTPKSGKYTA EFYATLDAAE KFTSQNPFFK VAMQAAHIKK GTMTVPAVFA TQHLTDITRM  420
VITLKVSDEK TWEVHYVSGT PTEKRISLGW REFVADNGLK EGDVCVFELV DFREKSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-30B3 family protein