PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428726.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 204aa    MW: 22891.3 Da    PI: 7.3889
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428726.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.33.4e-40371361100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lr++C ++C+lapyfp + p kf  +h++FGasn++k+l++lpe++r da+s +vyeA+ r+rdPvyG++g+i +lq+q+  l+a+la
  XP_026428726.1  37 PCAACKILRQRCGEKCILAPYFPPTGPLKFTTAHRVFGASNITKMLQELPESQRVDAVSNMVYEANSRIRDPVYGCAGTIYQLQKQVTDLQAQLA 131
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026428726.1 132 KSHAE 136
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLYNGIFEWV HQLIPPLPPN IYTQSPAPSL SQVVVTPCAA CKILRQRCGE KCILAPYFPP  60
TGPLKFTTAH RVFGASNITK MLQELPESQR VDAVSNMVYE ANSRIRDPVY GCAGTIYQLQ  120
KQVTDLQAQL AKSHAEIISM QCQQAHFVGP LCMEMKQHSQ YQQQQQQPTT TPMSLTSSLS  180
SLQLQQDVDD FMMSNTVTTQ IQQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-62LBD family protein