PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428796.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 180aa    MW: 20417.3 Da    PI: 10.1399
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.34.5e-2212106291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     fY++Y+++ GF +rk++s+ ++r  +it+  fvC +eg ++++ ++     ek+++  ++ rtgC+a+l++ +++  ++w+v++++ +HnH+++p
  XP_026428796.1  12 FYRAYGRSRGFITRKRSSYATRRGPQITRVIFVCCCEGLHKKHVDSndddGEKKKNGASTMRTGCEAMLRIALNTkCNTWYVNEFKDHHNHDMVP 106
                     9*************************************99998877777677777888899*************989**************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEIHSIEEAG AFYRAYGRSR GFITRKRSSY ATRRGPQITR VIFVCCCEGL HKKHVDSNDD  60
DGEKKKNGAS TMRTGCEAML RIALNTKCNT WYVNEFKDHH NHDMVPPRKQ VFMKSNKVFP  120
PATTNLAEAS SKHTTKQKAF RDGQKNVPTT GKPPQKDIRD VCCCVPRSTV TNTIRDGFSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.12e-12FAR1 family protein