PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429085.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 565aa MW: 63572.9 Da PI: 8.5047

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.1	3.3e-13	29	86	35	98
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 +tl+de+g ++ vk++y+ ks +++GW++Fvk ++L++gD vvF + ++f + v +fr XP_026429085.1 29 IVTLKDEEGGKYIVKYKYKSKS----FQGGWSGFVKNHDLRVGDAVVFN---QiDKFVFDVYMFR 86 699***********655555....9********************...3367767777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MGVSPLHRTS FDGCAIIGVA IETVTYEEIV TLKDEEGGKY IVKYKYKSKS FQGGWSGFVK 60 NHDLRVGDAV VFNQIDKFVF DVYMFRARDK SENVVCQHQC KSKCAADKAS TSTSFTEARE 120 SICPEAMSLR TELEELKQKL LEMAQDRDRL LLQVNSLSYA VKYNGESSVQ ESKNLLIKTL 180 ERDLADVRGK LQVSSKKNME VQSELESRNK LVDTLKEELV EAEKLRIKLQ NMILELKGNI 240 RVFCRVRPPV HDDGKQIKIS YPKSVEEKGH AIHLSKNAKY KKKQPAMRVM FFPSGVSLRE 300 EGDVFVDVSE LVQSALDGKK VCIFAYGQTG SGKTYTMIGG LDQKDKEEKG IIPRSVEQIF 360 QYFQSVKTKG WKYNLKVTVL EIYKEQIHDL LDPKSGEQKK YIISHGKDGK AVVPHLTEED 420 ISGPEQFISL LKQVSERRCT EHTLMNEQSS RSHLVLTLNI SRVTESSQVH GFLNMIDLAG 480 NENLKESGAI GDRAEEAKAI NKSLSAFTGV IQALVPKNTH VPYRESLLTH LLQPCLEGDS 540 KTLMVVNISP SLESVRHSVK SCSHS

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MGVSPLHRTS FDGCAIIGVA IETVTYEEIV TLKDEEGGKY IVKYKYKSKS FQGGWSGFVK  60
NHDLRVGDAV VFNQIDKFVF DVYMFRARDK SENVVCQHQC KSKCAADKAS TSTSFTEARE  120
SICPEAMSLR TELEELKQKL LEMAQDRDRL LLQVNSLSYA VKYNGESSVQ ESKNLLIKTL  180
ERDLADVRGK LQVSSKKNME VQSELESRNK LVDTLKEELV EAEKLRIKLQ NMILELKGNI  240
RVFCRVRPPV HDDGKQIKIS YPKSVEEKGH AIHLSKNAKY KKKQPAMRVM FFPSGVSLRE  300
EGDVFVDVSE LVQSALDGKK VCIFAYGQTG SGKTYTMIGG LDQKDKEEKG IIPRSVEQIF  360
QYFQSVKTKG WKYNLKVTVL EIYKEQIHDL LDPKSGEQKK YIISHGKDGK AVVPHLTEED  420
ISGPEQFISL LKQVSERRCT EHTLMNEQSS RSHLVLTLNI SRVTESSQVH GFLNMIDLAG  480
NENLKESGAI GDRAEEAKAI NKSLSAFTGV IQALVPKNTH VPYRESLLTH LLQPCLEGDS  540
KTLMVVNISP SLESVRHSVK SCSHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	284	AKYKKKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	8e-08	B3 family protein